@eroyal93 - let me just add one comment... and feel free to ignore me if you'd rather.
Your research is indeed very impressive, but I would encourage you to keep your plan as simple as possible. My concern is you are trying to use ALL the ideas, instead of narrowing your focus. Is this a dedicated koi pond that requires extensive filtration because you're keeping more fish than a simple biological filter can handle? You started off by introducing this as your dream zen garden pond, but I worry that you're making it all way too complicated and will spend all your time keeping your various filters clean and functional. While there are "parameters" for a bog regarding surface area as it relates to the pond, my bog doesn't even come close and yet it works like a dream. We've never had green water, never struggled with water clarity, from day one. The surface area really relates more to the amount of plants that you are able to incorporate and much of the more current information points to the gravel being the real workhorse in the bog. My bog is four feet deep - not anywhere near what's standard, but again - it functions beautifully.
Honestly, I read your plans and my head starts to spin... but again - maybe that's just me. Just one ponders opinion!