@john - the spores was just an example, but there are certainly numerous examples of things that can survive for long periods out of their natural environment... Algae that will not die no matter what, brine shrimp eggs surviving for decades, even fish that can go on land. The possibility is there, even though I think we most agree that the probability is very low for bacteria.
@Mucky - My best guess is that there is some confusion in the matter. You might be able to have *some* bacteria survive in a bottle, and help establish a new colony, however that number is going to be substantially lower than the amount of bacteria that develops in your filters. Compare that with the total loss from leaving the pumps off for too long... yes your filters will be wiped out, but there will almost definitely be *some* survivors. If you add a new bottle of bacteria, you might double the number in your filter, which makes it feel like the colony rebounds that much faster, but chances are you would never completely destroy your bacteria population without completely draining and drying out the filter (and you would still have some living in the pond).
One consideration that might lend some credit to this whole matter... and this is just a wild guess... In most species when they interbreed for too long, the population gets weak, but adding in new genes helps re-strengthen the species and allow them to grow stronger. Perhaps bacteria is the same way, and adding a bottle introduces new genes that strengthens the colony and helps them grow faster? Again, just a wild guess.